BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036G12LP1|AL430292
(939 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1271 699 0.0
3x_Contig1415 586 e-167
>3x_Contig1271
Length = 7459
Score = 699 bits (352), Expect = 0.0
Identities = 355/356 (99%)
Strand = Plus / Minus
Query: 1 acccggagttttttttccgttagaccagccagctaggtaagcgcgccaaacaatgtcaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 acccggagttttttttccgttagaccagccagctaggtaagcgcgccaaacaatgtcaag 297
Query: 61 atatgcctcgaactactcagtttatttggcaagaatcggatagtgtcttgactaatgtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 atatgcctcgaactactcagtttatttggcaagaatcggatagtgtcttgactaatgtga 237
Query: 121 aacttctcacgacgtgcaagccggtttttggttttctttttctcgtttttcctacttcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 aacttctcacgacgtgcaagccggtttttggttttctttttctcgtttttcctacttcct 177
Query: 181 gtgcctgtctgtctaacctgatttggcctggaccaatgaatcaccaggattacccattga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 gtgcctgtctgtctaacctgatttggcctggaccaatgaatcaccaggattacccattga 117
Query: 241 gttgctggctgtggtgtcaagtttaatgtagtctcgttaccttaatgatttcccctcccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 gttgctggctgtggtgtcaagtttaatgtagtctcgttaccttaatgatttcccctcccc 57
Query: 301 cactgcttaattactaacaatttccatctgccattaatgttgtccatttgtcattt 356
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 56 cactgcttaattactaacaatgtccatctgccattaatgttgtccatttgtcattt 1
>3x_Contig1415
Length = 6436
Score = 586 bits (295), Expect = e-167
Identities = 297/299 (99%)
Strand = Plus / Plus
Query: 641 ttttttttttaccccatcctatttactgaacactaccataccaattcccctccccgaatt 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttttttttttaccccatcctatttactgaacactaccataccaattcccctccccgaatt 60
Query: 701 gctagctctcggagtctaaacacaactgagagaagagggggtgcattcttttcatttcgt 760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gctagctctcggagtctaaacacaactgagagaagagggggtgcattcttttcatttcgt 120
Query: 761 ttcccaacatactgtagatagttacaaatcggttcggttcaattgtttcctgctctgcat 820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttcccaacatactgtagatagttacaaatcggttcggttcaattgtttcctgctctgcat 180
Query: 821 gattttcataactaacgattgtyaaacatagtgcagttcctagggcttttttccttccgg 880
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 181 gattttcataactaacgattgtcaaacatagtgcagttcctagggcttttttccttccgg 240
Query: 881 ttacttttttttttcttagctgaaaaataattacgacagagtatgagtkaagaagaggg 939
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 241 ttacttttttttttcttagctgaaaaataattacgacagagtatgagtgaagaagaggg 299
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,551
Number of Sequences: 1807
Number of extensions: 13551
Number of successful extensions: 62
Number of sequences better than 1.0e-20: 2
length of query: 939
length of database: 10,358,551
effective HSP length: 16
effective length of query: 923
effective length of database: 10,329,639
effective search space: 9534256797
effective search space used: 9534256797
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)